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ecce/ proteins of the inner membrane/ hypothetical
The hypothetical proteins of the inner membrane can be devided into proteins with probable functions (by similarity to other proteins of the same function)
Probable Sensor Proteins
Putative General Secretion Proteins
Proteins Involved in Transport
and proteins with unknown function.
This large number of proteins is divided into three alphabetically sorted groups:
Hypothetical Proteins Yaa- - Yd--
Hypothetical Proteins Ye-- - Yi--
Hypothetical Proteins Yj-- - Yt--



Probable Sensor Proteins of the Inner Membrane:

Probable sensor protein YbcZ (ybcZ )
functionprobable member of a two-component regulatory system YbcZ/YlcA, may activate YlcA via phosphorylation
possible copper ion sensor
interaction 
regulation 
topologytransmembrane domains: 2 (potential)

TMHMM gives 15-37 187-206
SP gives 16-36 187-207

mvskpfqrpf slatRLTFFI SLATIAAFFA FAWIMIHsvk vhfaeqdind
lkeisatler vlnhpdetqa rrlmtlediv sgysnvlisl adsqgktvyh
spgapdiref trdaipdkda qggevyllsg ptmmmpghgh ghmehsnwrm
inlpvgplvd gkpiytlyia lsidfhlhyi ndlmnkLIMT ASVISILIVF 200
IVLLAVhkgh apirsvsrqi qnitskdldv rldpqtvpie leqlvlsfnh
mieriedvft rqsnfsadia heirtpitnl itqteialsq srsqkeledv
lysnleeltr makmvsdmlf laqadnnqli pekkmlnlad evgkvfdffe
alaedrgvel rfvgdkcqva gdplmlrral snllsnalry tptgetivvr 400
cqtvdhlvqv ivenpgtpia pehlprlfdr fyrvdpsrqr kgegsgigla
ivksivvahk gtvavtsdar gtrfvitlpa

MW53738 Da; 480 aa


Probable sensor protein YedV (yedV )
functionprobable member of a two-component regulatory system YedW/YedV, may activate YedW via phosphorylation
interaction 
regulation 
topologytransmembrane domains: 2 (potential)

TMHMM gives 10-32 159-181
SP gives 10-30 159-179

mkrlsitvrL TLLFILLLSV AGAGIVWTLY NGlaselkwr ddttlinrta
qikqllidgv npdtlpvyfn rmmdvsqdil iihgdsinki vnrtnvsdgm
lnnipaseti saagiyrsii ndteidalri nidevspslt vtvaklasar
hnmleqykIN SIIICIVAIV LCSVLSPLLI Rtglreikkl sgvtealnyn 200
dsrepvevsa lprelkplgq alnkmhhalv kdferlsqfa ddlahelrtp
inallgqnqv tlsqtrsiae yqktiagnie elenisrlte nilflaradk
nnvlvkldsl slnkevenll dyleylsdek eicfkvecnq qifadkillq
rmlsnlivna iryspeksri hitsfldtns ylnidiaspg tkinepeklf 400
rrfwrgdnsr hsvgqglgls lvkaiaelhg gsatyhylnk hnvfritlpq
rn

MW50849 Da; 452 aa


Probable sensor protein YfhK (yfhK )
functionprobable member of a two-component regulatory system YfhK/YfhA, may activate YfhA via phosphorylation
interaction 
regulation 
topologytransmembrane domains: 2 (potential)

TMHMM gives 35-52 196-218
SP gives 35-55 195-215

mlylnfpsvs irlfasdesn tlkrwpvfpr slrqLVMLAF LLILLPLLVL
AWqawqslna lsdqaalvnr ttlidarrse amtnaaleme rsyrqycvld
dptlakvyqs qrkrysemld ahagvlpddk lyqalrqdlh nlaqlqcnns
gpdaaaaarl eafasantem vqatrtvvfs rgqqlqreia ergqyFGWQS 200
LVLFLVSLVM VLLFTRMIIg pvkniermin rlgegrslgn svsfsgpsel
rsvgqrilwl serlswlesq rhqflrhlsh elktplasmr egtelladqv
vgpltpeqke vvsildsssr nlqklieqll dynrkqadsa velenvelap
lvetvvsahs lparakmmht dvdlkatacl aepmllmsvl dnlysnavhy 400
gaesgniclr sslhgarvyi dvintgtpip qeeramifep ffqgshqrkg
avkgsglgls iardcirrmq gelylvdesg qdvcfrielp sskntk

MW55699 Da; 496 aa


Probable sensor protein YgiY (ygiY )
functionprobable member of a two-component regulatory system YgiX/YgiY, may activate YgiX via phosphorylation
interaction 
regulation 
topologytransmembrane domains: 2 (potential)

TMHMM gives 10-32 160-182
SP gives 13-33 157-177

mkftqrlslR VRLTLIFLIL ASVTWLLSSF VAwkqttdnv delfdtqlml
fakrlstldl neinaadrma qtpnrlkhgh vdddaltfai fthdgrmvln
dgdngedipy syqregfadg qlvgeddpwr fvwmtspdgk yrivvgqewe
yredmalaiV AGQLIPWLVA LPIMLIIMMV LLgrelapln klalalrmrd 200
pdsekplnat gvpsevrplv eslnqlfart hammvrerrf tsdaahelrs
pltalkvqte vaqlsdddpq arkkallqlh sgidratrlv dqlltlsrld
sldnlqdvae ipledllqss vmdiyhtaqq akidvrltln ahsikrtgqp
lllsllvrnl ldnavryspq gsvvdvtlna dnfivrdngp gvtpealari 400
gerfyrppgq tatgsglgls ivqriaklhg mnvefgnaeq ggfeakvsw

MW50281 Da; 449 aa


Probable sensor protein YojN (yojN )
function 
interaction 
regulation 
topologytransmembrane domains: 2 (potential), TMHMM has 1

TMHMM gives 21-43
SP gives 22-42 309-329

mrqkettatt rfsllpgsit RFFLLLIIVL LVTMGVMVQS AVNawlkdks
yqivdithai qkrvdnwryv twqiydniaa ttspssgegl qetrlkqdvy
ylekprrkte alifgshdns tlemtqrmst yldtlwgaen vpwsmyylng
qdnslvlist lplkdltsgf kestvsdivd srraemlqqa nalderesfs 200
nmrrlawqng hyftlrttfn qpghlatvva fdlpindlip pgmpldsfrl
epdatatgnn dnekegtdsv sihfnstkie issalnstdm rlvwqvpygt
llldtLQNIL LPLLLNIGLL ALALFGYttf rhfssrsten vpstavnnel
rilraineei vsllplgllv hdqesnrtvi snkiadhllp hlnlqnittm 400
aeqhqgiiqa tinnelyeir mfrsqvaprt qifiirdqdr evlvnkklkq
aqrlyeknqq grmifmknig dalkepaqsl aesaaklnap eskqlanqad
vlvrlvdeiq lanmladdsw ksetvlfsvq dlidevvpsv lpaikrkglq
llinnhlkah dmrrgdrdal rrillllmqy avtstqlgki tlevdqdess 600
edrltfrild tgegvsihem dnlhfpfinq tqndrygkad plafwlsdql
arklgghlni ktrdglgtry svhikmlaad peveeeeerl lddvcvmvdv
tsaeirnivt rqlenwgatc itpderlisq dydifltdnp snltasglll
sddesgvrei gpgqlcvnfn msnamqeavl qlievqlaqe evtesplggd 800
enaqlhasgy yalfvdtvpd dvkrlyteaa tsdfaalaqt ahrlkgvfam
lnlvpgkqlc etlehlirek dvpgiekyis didsyvksll

MW100372 Da; 890 aa


Hypothetical Proteins Probably Involved in Protein Secretion

Putative general secretion pathway protein C (gspC )
functioninvolved in a general exretion pathway for the export of proteins
interaction 
regulation 
topologytransmembrane domains: 1 (potential)

TMHMM gives 21-43
SP gives 17-35

mptlrfpfhl anhnkdaain ILIIFISIGS IIFNVNYFHT TIVkngqiin
qptnafqsdf slaalwrnen hagvkdanpv avnqetpkls ialngivlts
ndetsfvlin egseqkrysl nealesapgt firkinktsv vfethghyek
vtlhpglpdi ikqpdsesqn vladyiiatp irdgeqiygl rlnprkglna 200
fttsllqpgd ialrinnlsl thpdevsqal sllltqqsaq ftirrngvpr
linvsvgelt gmnglrhert q

MW30038 Da; 271 aa


Putative general secretion pathway protein K (gspK )
functioninvolved in a general exretion pathway for the export of proteins
interaction 
regulation 
topologytransmembrane domains: 1 (potential)

TMHMM gives 7-29
SP gives 7-27

mnneqrGVAL LIVLMLLALM AALAADMTLs fhsqlqrtrq vnhhlqrqyd
ielaeklala sltqdvkdnd rqttlqqywa qpqqlqledg ntvkwqlrda
qhcfnlnala kisddplasp dfpaqvfsal linagidrgn tdeivqsiad
yidvddsprf hgaedsfyqs qtpprhsanq mlfltgelrq ikgiteniyq 200
rlipyvcvlp ttelsinlnm ltendiplfr alflnnitda darvllqkrp
regwlttdaf lywaqqdfsg vkplvaqvkr hlfpysryft lstesisdeq
sqgwqshiff nrkqqsaqiy rrtlqly

MW37646 Da; 327 aa


Putative general secretion pathway protein L (gspL )
functioninvolved in a general exretion pathway for the export of proteins
interaction 
regulation 
topologytransmembrane domains: 0 (potential), SP has 1

TMHMM gives 0
SP gives 242-260

mpeslmvirs sstlrkhwew mtfsadsvss vhtltddlpl esladqpgag
nvhllippeg llyrsltlpn akykltaqtl qwlaeetlpd ntqdwhwtvv
dkqnesvevi giqseklsry lerlhtagln vtrvlpdgcy lpwevdswtl
vnqqtswlir saahafneld ehwlqhlaaq fppenmlcyg vvphgvaaan 200
pliqhpeips lslysadiaf qrydmlhgif rkqktvsksg kwlarlavsc
lvlailsfvg srsialwhtl kiedqlqqqq qetwqryfpq ikrthnfrfy
fkqqlaqqyp eavpllyhlq tlllehpelq lmeanysqkq ksltlkmsak
seanidrfce ltqswlpmek tekdpvsgvw tvrnsgk

MW44540 Da; 387 aa


Putative general secretion pathway protein M-type YghD (yghD )
functioninvolved in a general exretion pathway for the export of proteins
interaction 
regulation 
topologytransmembrane domains: 1 (potential)

TMHMM gives 38-57
SP gives 40-60

mlrdkfihyf qqwrerqlsr gehwlaqhla grsprekGML LAAVVFLFSV
GYYVLIWqpl serieqqeti lqqlvamntr lknaapdiia arksatttpa
qvsrvisdsa sahsvvirri adrgeniqvw iepvvfndll kwlnaldeky
alrvtqidvs aaekpgmvnv qrlefgrg

MW20394 Da; 178 aa


Putative general secretion pathway protein L-type YghE (yghE )
functioninvolved in a general exretion pathway for the export of proteins
interaction 
regulation 
topologytransmembrane domains: 1 (potential)

TMHMM gives 131-150
SP gives 136-156

mihqqhmrni aqwlqengit ratvapdwms ipcgfmacda qrvicridec
rgwsaglala pvmfraqlne qdlplsltvv giapeklsaw agadaerltv
talpaittyg epegnlltgp wqprvsyrkq WARWRVMILP ILLILVALAV
ergvtlwsvs eqvaqsrtqa eeqfltlfpe qkrivnlrsq vtmalkkyrp 200
qaddtrllae lsaiastlks aslsdiemrg ftfdqkrqil hlqlraanfa
sfdklrsvla tdyvvqqdal qkegdavsgg vtlrrk

MW32058 Da; 286 aa